locat module#
The locat package provides the implementation of Locat.
The main class is found under locat.LOCAT
Submodules#
- locat.locat module
LOCATLOCAT.W_tLOCAT.__init__()LOCAT.auto_bkg_components()LOCAT.auto_n_components()LOCAT.background_n_components_init()LOCAT.background_pdf()LOCAT.bic_score()LOCAT.calc_lratio()LOCAT.cell_distLOCAT.depletion_pval_scan()LOCAT.estimate_null_parameters()LOCAT.fit_wgmm()LOCAT.get_gene_prior()LOCAT.get_genes_indices()LOCAT.gmm_local_pvalue()LOCAT.gmm_local_scan()LOCAT.gmm_loglikelihoodtest()LOCAT.gmm_scan()LOCAT.init_rng()LOCAT.knn()LOCAT.localization_pval_dep_scan()LOCAT.min_distLOCAT.random_pdf()LOCAT.reg_covar()LOCAT.set_knn()LOCAT.show_progress()LOCAT.signal_gmm()LOCAT.signal_pdf()
LOCATNullDistributioncauchy_combine()localization_pvalue_nn_func()logsidak_from_logp()ltst_score_func()normal_sf()sens_score_func()smooth_qvals()summarize_rc_debug()
- locat.locat_result module