Add gene bin score

Add gene bin score

AddGeneBinScore(
  object,
  gene.trajectory,
  N.bin = 5,
  trajectories = 1:2,
  assay = "RNA",
  prefix = "Trajectory",
  reverse = NULL,
  echo = F
)

Arguments

object

Seurat object

gene.trajectory

Gene trajectory data frame

N.bin

integer; How many gene bins

trajectories

vector; Which gene trajectories to define gene bin score

assay

string; Which assay to use

prefix

string; String added to the names in the metadata

reverse

vector; Whether to reverse the order of genes along each trajectory

echo

boolean; Whether to print messages

Value

Seurat object with gene bin score added in the metadata