simulate_cyclic.Rd
Simulate cyclic gene process
simulate_cyclic(
N_cells = 1000,
N_genes = 500,
model = "poisson",
meanlog = 0,
sdlog = 0.25,
scale_l = 1,
scale = 25,
seed = 1,
maxT = 15,
sparsity = NULL,
theta = 10
)
integer; Number of cells
integer; Number of genes
character; Count model ("poisson" or "negbin")
numeric; Mean of log normal distribution
numeric; Standard deviation of log normal distribution
numeric; Scale of UMI counts
integer; Random seed
numeric; Maximum cell pseudotime
numeric; Sparsity of count matrix
numeric; Dipersion parameter for negative binomial model
Returns a gene-by-cell count matrix