Visualize Graph

Visualizes a graph using a given affinity matrix and node layout.

VisualizeGraph(affinity_m, label = NULL, layout)

Arguments

affinity_m

matrix; symmetric affinity matrix of the graph.

label

vector; node labels (optional). Default is NULL.

layout

matrix; a 2D coordinate matrix of cells to visualize the graph.

Value

A ggplot2 object representing the plotted graph.

Examples

affinity_m <- matrix(runif(100), nrow = 10)
layout <- matrix(runif(20), nrow = 10)
label <- sample(letters[1:3], 10, replace = TRUE)
plot <- VisualizeGraph(affinity_m, label, layout)
print(plot)