Package index • LocalizedMarkerDetector

Construct Cell Graphs
`ConstructKnnGraph()`	Construct a Symmetric KNN graph
`ConstructDiffusionOperators()`	Construct Diffusion Operators
Calculate LMD Score
`LMD()`	Calculate Localized Marker Detector Score (LMDS) for each gene
`fast_get_lmds()`	Fast Get LMDS
`show_result_lmd()`	Show LMD Result
Obtain Gene Modules
`CalculateGeneDistance()`	Calculate Gene Pairwise Distance
`ClusterGenes()`	Cluster Genes
Calculate Cell Module Scores
`AddModuleActivityScore()`	Add Module Activity Score
Visualization
`VisualizeGraph()`	Visualize Graph
`CustomFeaturePlot()`	Custom Feature Plot
`VisualizeDiffusion()`	Visualize Diffusion
`CustomModulePlot()`	Plot Feature Modules
`VisualizeScorePattern()`	Visualize Score Pattern
`VisualizeGeneHeatmap()`	Visualize Gene Distance Heatmap
`VisualizeGeneTSNE()`	Visualize Gene t-SNE
Other
`RowwiseNormalize()`	Row-wise Normalize a Matrix

Reference